Payroll ecosystem

Payroll done right — every pay period, every state

Payroll is the easiest place to leak money to penalties and the hardest place to recover from a mistake. This hub helps you pick the right provider tier — DIY software, full-service, or CPA-managed — and the state coverage you actually need.

Provider tiers

DIY, full-service, or CPA-managed — pick the right tier

The right tier depends on whether you can absorb a $5,000 federal tax penalty for a single missed 941. For most growing businesses, full-service is the floor.

  • DIY (Gusto Simple, QBO Payroll Core): $40–$60 base + $6/employee
  • Full-service (Gusto Plus, Rippling, ADP Run): $80–$200 base + $12/employee
  • CPA-managed (your firm runs payroll inside Gusto Pro): retainer $400–$1,200/mo
  • Enterprise (ADP Workforce Now, Paylocity): $200+/employee/year

Multi-state

Remote workers = new state tax registrations

One remote hire in a new state triggers withholding registration, unemployment account setup, and quarterly filings — even for a single employee.

  • Register state withholding and SUTA within 20 days of first wages
  • Workers' comp policy must extend to the new state
  • City/local taxes: NYC, Philadelphia, San Francisco, Detroit, KCMO
  • Reciprocity agreements reduce double withholding (e.g., NJ/PA)
  • Convenience-of-employer rules (NY, CT, NE, DE, PA, AR) tax remote NY employees as NY-source

Tax deposits

941, 940, state UI, and the schedules that matter

Federal payroll deposits are made on a monthly or semi-weekly schedule based on lookback. State UI is usually quarterly.

  • Form 941 — quarterly federal payroll return
  • Form 940 — annual FUTA (0.6% effective on first $7,000)
  • State UI/SUTA — quarterly, varies $7,000–$57,000 wage base
  • Form W-2 — January 31 to employees and SSA
  • Form 1099-NEC — January 31 for contractor payments at or above $600

Benefits & deductions

401(k), HSA, and pre-tax setups that pay back

Pre-tax deductions reduce federal income tax, FICA (7.65% employer + 7.65% employee), and most state income tax — real savings for both sides.

  • 401(k): Safe Harbor avoids non-discrimination testing
  • HSA: triple tax-advantaged when paired with HDHP
  • FSA dependent care: up to $5,000 pre-tax
  • Section 125 POP for premium-only pre-tax health deduction

Adjacent ecosystems

Pair this with the rest of CPAZenith

FAQ

Common questions

How much does payroll cost per employee?

Full-service payroll runs $6–$15 per employee per pay period plus a base fee of $40–$200/month. CPA-managed payroll inside your bookkeeping retainer typically lands at $400–$1,200/month for sub-25-employee shops.

What's the best payroll service for small business?

Gusto Plus is the default for 1–25 employees: clean UX, full state coverage, benefits administration, and contractor payments. Rippling wins for tech-forward teams that want HRIS + payroll + IT in one. ADP Run is the safe choice if you anticipate scaling past 50 FTE.

Do I need to register for payroll tax in every state where I have an employee?

Yes. Each state where you have a W-2 employee requires a state withholding account and an unemployment (SUTA) account. Most providers handle the filings but you have to complete the initial registration yourself.

What's the difference between a payroll service and a PEO?

A payroll service runs your payroll on your EIN. A PEO (Professional Employer Organization) co-employs your staff on the PEO's EIN, giving you access to Fortune-500-priced benefits in exchange for a per-employee fee of 2–11% of payroll.

Can my CPA run payroll for me?

Most CPAs partner with Gusto Pro, Rippling, or ADP Accountant Connect to run payroll on your behalf and integrate it with your monthly bookkeeping close. See CPA Payroll Services for combined pricing.

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